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Sixth Edition
Bioinformatica e Biologia Computazionale in Campania
4 Novembre 2011
Istituto di Scienze dell'Alimentazione, CNR, Avellino


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9.30 Registration
10.00 Introduction
10.30 Gene Wiki: Crowdsourcing Knowledge Extraction From the Biomedical Literature
Salvatore Loguercio
Biotechnology Center, Technische Universitat Dresden, Germany
11.00 Understanding, Communicating and Automatically Managing Bioinformatic Protocols
Francesco Napolitano
Dipartimento di Informatica, Universita' di Salerno
11.20 A correlation graph clustering algorithm for analyzing gene expression data
Crescenzio Gallo
Universita' di Foggia
11.40 Computational approaches for genome-wide mRNA and miRNA expression profiling in human breast cancer cell lines expressing (ERbeta+) or lacking (ERbeta-) estrogen receptor beta by microarray hydribization and massively parallel sequencing (miRNA-Seq)
Maria Rosaria De Filippo
Lab. di Medicina Molecolare e Genetica, Fac. Medicina, Universita' di Salerno
12.00 Functional effect of the intrinsic disorder in the family of the human chemokine membrane receptors
Giovanni Colonna
Seconda Universita' di Napoli
12.20 Discussion with all participants:
- scientific highlights from oral presentations
- bioinformatics and computational biology perspectives
Break for lunch and Poster Session

14.20 Integer programming models for RNA tertiary structure reconstruction
Maria De Cola
14.40 Simulating gene-gene and gene-environment interactions in complex diseases: Gene-Environment iNteraction Simulator 2
Giovanni Scala
Universita' di Napoli Federico II
15.00 Molecular investigations of the interaction between the ligand-binding domain of the Human aryl-hydrocarbon receptor and its endogenous ligands and xenobiotics from dietary sources.
Maria Salzano
ISA-CNR and Seconda Universita' di Napoli
15.20 COCOMAPS and CONS-COCOMAPS: novel web tools for the analysis of crystallographic complexes and of multiple docking solutions
Anna Vangone
Universita' di Salerno
15.40 Solving Biclustering with a GRASP-like Metaheuristic: Two Case-Studies on Gene Expression Analysis
Francesco Musacchia
Universita' di Napoli Federico II
16.00 Gene profiling of human PBMCs ex vivo vaccinated with anti idiotypic vaccine for HCV-related lymphoproliferative disorders
Annacarmen Petrizzo
Fondazione G. Pascale, Napoli
16.20 Structural analysis of Antarctic teleost Toll-like receptor 2
Maria Rosaria Coscia
IBP-CNR, Napoli
16.40 Discussion with all participants:
- scientific highlights from oral presentations and posters
- BBCC network

17.20Meeting Closure